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Difference between revisions of "TSS:Hg 102828.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK095423:0 BC049388:10 ENST00000372271.4:19 NM_033387:19 BC152842:350 BC156765:350 AB528860:350 CU690620:408 KJ904173:409
+
|all_trans=HGNC:25465
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_033387
 
|nearest_refseq=NM_033387
 
|nearest_unigene=Hs.143878
 
|nearest_unigene=Hs.143878
|num_trans=9
+
|num_trans=286336
 
|species=human
 
|species=human
 
|start=131276528
 
|start=131276528

Latest revision as of 18:35, 19 July 2021

Basic information about the TSS


TSS ID:hg_102828.1
Species:human
Chr:chr9
TSS Classification:yes
Start:131276528
End:131276559
Strand:-
TSS Score:1
Start of the center position in the TSS region:131276543
End of the center position in the TSS region:131276544



Gene and protein annotation


Transcript_name:AK095423
Distance:0
GeneID:286336
HGNC/MGI_ID:HGNC:25465
UniProt_ID:
Gene_name:family with sequence similarity 78 member A
Gene_symbol:FAM78A
Gene_synonyms:FLJ00024
Gene_source:HGNC:25465



Transcript annotation


Transcript_name:AK095423
Distance:0
Num_trans:286336
All_trans:HGNC:25465



TATA-Box annotation


Distance to TSS:-34
Nearest PromoterID:NM_033387
Entrez ID:286336
Nearest Unigene:Hs.143878
Nearest Refseq:NM_033387
Nearest Ensembl:ENSG00000126882
Gene Name:family with sequence similarity 78 member A
Gene Alias:C9orf59
Gene Description:family with sequence similarity 78 member A
Gene Type:protein-coding
CpG%:0.11
GC%:0.691542
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):