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Difference between revisions of "TSS:Hg 102892.1"

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Line 2: Line 2:
 
|AOA2=
 
|AOA2=
 
|SCAR1=
 
|SCAR1=
|all_trans=BX537849:-37 AK307608:-37 BX538166:-53 ENST00000224140.6:-54 NM_015046:-54 NM_001351528:-54 NM_001351527:63 AK125448:63
+
|all_trans=HGNC:445
 
|bA479K20.2=
 
|bA479K20.2=
 
|chr=chr9
 
|chr=chr9
Line 25: Line 25:
 
|nearest_refseq=NM_015046
 
|nearest_refseq=NM_015046
 
|nearest_unigene=Hs.460317
 
|nearest_unigene=Hs.460317
|num_trans=8
+
|num_trans=23064
 
|species=human
 
|species=human
 
|start=132354918
 
|start=132354918

Latest revision as of 18:37, 19 July 2021

Basic information about the TSS


TSS ID:hg_102892.1
Species:human
Chr:chr9
TSS Classification:yes
Start:132354918
End:132354932
Strand:-
TSS Score:1
Start of the center position in the TSS region:132354925
End of the center position in the TSS region:132354926



Gene and protein annotation


Transcript_name:BX537849 AK307608
Distance:-37
GeneID:23064
HGNC/MGI_ID:HGNC:445
UniProt_ID:
Gene_name:senataxin
Gene_symbol:SETX
Gene_synonyms:AOA2 KIAA0625 Sen1
Gene_source:HGNC:445



Transcript annotation


Transcript_name:BX537849 AK307608
Distance:-37
Num_trans:23064
All_trans:HGNC:445



TATA-Box annotation


Distance to TSS:61
Nearest PromoterID:NM_015046
Entrez ID:23064
Nearest Unigene:Hs.460317
Nearest Refseq:NM_015046
Nearest Ensembl:ENSG00000107290
Gene Name:senataxin
Gene Alias:ALS4|AOA2|SCAN2|SCAR1|Sen1|bA479K20.2
Gene Description:senataxin
Gene Type:protein-coding
CpG%:0.11
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):