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Difference between revisions of "TSS:Hg 102905.1"

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Line 5: Line 5:
 
|TFIIIC90=
 
|TFIIIC90=
 
|TFIIICDELTA=
 
|TFIIICDELTA=
|all_trans=AK225121:0 NM_001322341:-17 NR_136309:-17 AK027002:-18 AK225350:-20 AK304715:-50 ENST00000438527.7:-61 BC012726:-61 BC156832:-283 ENST00000372159.7:-435 ENST00000372153.5:-435 ENST00000310532.6:-435 ENST00000480876.2:-435 ENST00000482620.1:-435 NM_022779:-435 NM_001322340:-435 NM_138620:-435 NM_001322344:-435 AF427339:-435 AF335568:-435 AF335569:-435 AK027484:-435 AF335567:-435
+
|all_trans=HGNC:16715
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 27: Line 27:
 
|nearest_refseq=NM_022779
 
|nearest_refseq=NM_022779
 
|nearest_unigene=Hs.660767
 
|nearest_unigene=Hs.660767
|num_trans=23
+
|num_trans=64794
 
|species=human
 
|species=human
 
|start=132669936
 
|start=132669936

Latest revision as of 18:37, 19 July 2021

Basic information about the TSS


TSS ID:hg_102905.1
Species:human
Chr:chr9
TSS Classification:yes
Start:132669936
End:132669966
Strand:-
TSS Score:1
Start of the center position in the TSS region:132669951
End of the center position in the TSS region:132669952



Gene and protein annotation


Transcript_name:AK225121
Distance:0
GeneID:64794
HGNC/MGI_ID:HGNC:16715
UniProt_ID:
Gene_name:DEAD-box helicase 31
Gene_symbol:DDX31
Gene_synonyms:FLJ13633 FLJ14578 FLJ23349 PPP1R25
Gene_source:HGNC:16715



Transcript annotation


Transcript_name:AK225121
Distance:0
Num_trans:64794
All_trans:HGNC:16715



TATA-Box annotation


Distance to TSS:32
Nearest PromoterID:NM_001322341
Entrez ID:64794
Nearest Unigene:Hs.660767
Nearest Refseq:NM_022779
Nearest Ensembl:ENSG00000125485
Gene Name:DEAD-box helicase 31
Gene Alias:PPP1R25
Gene Description:DEAD-box helicase 31
Gene Type:protein-coding
CpG%:0.125
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):