Difference between revisions of "TSS:Hg 102977.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GTB= | |GTB= | ||
|NAGAT= | |NAGAT= | ||
| − | |all_trans= | + | |all_trans=HGNC:79 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_020469 | |nearest_refseq=NM_020469 | ||
|nearest_unigene=Hs.654423 | |nearest_unigene=Hs.654423 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=133275191 | |start=133275191 | ||
|start_of_center_position=133275211 | |start_of_center_position=133275211 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000679909.1 ENST00000453660.4 ENST00000647353.1 ENST00000611156.4 ENST00000538324.2 | + | |transcript_name=ENST00000679909.1 ENST00000453660.4 ENST00000647353.1 ENST00000611156.4 ENST00000538324.2 AK302203 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102977.1 | |tss_id=hg_102977.1 | ||
Latest revision as of 18:38, 19 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 133275211 |
|---|---|
| End of the center position in the TSS region: | 133275212 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000679909.1 ENST00000453660.4 ENST00000647353.1 ENST00000611156.4 ENST00000538324.2 AK302203 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | HGNC:79 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_020469 |
| Entrez ID: | 28 |
| Nearest Unigene: | Hs.654423 |
| Nearest Refseq: | NM_020469 |
| Nearest Ensembl: | ENSG00000175164 |
| Gene Name: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Alias: | A3GALNT|A3GALT1|GTB|NAGAT |
| Gene Description: | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
