Difference between revisions of "TSS:Hg 10300.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Fbx44= | |Fbx44= | ||
|Fbxo6a= | |Fbxo6a= | ||
| − | |all_trans= | + | |all_trans=HGNC:13581 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_012168 | |nearest_refseq=NM_012168 | ||
|nearest_unigene=Hs.132753 | |nearest_unigene=Hs.132753 | ||
| − | |num_trans= | + | |num_trans=26232 |
|species=human | |species=human | ||
|start=11654422 | |start=11654422 | ||
| Line 32: | Line 32: | ||
|strand=- | |strand=- | ||
|tata_box=-34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00) | |tata_box=-34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00) | ||
| − | |transcript_name=ENST00000354287.5 | + | |transcript_name=ENST00000354287.5 BC096747 AK313019 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10300.1 | |tss_id=hg_10300.1 | ||
Latest revision as of 18:39, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11654429 |
|---|---|
| End of the center position in the TSS region: | 11654430 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000354287.5 BC096747 AK313019 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26232 |
| All_trans: | HGNC:13581 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_012168 |
| Entrez ID: | 26232 |
| Nearest Unigene: | Hs.132753 |
| Nearest Refseq: | NM_012168 |
| Nearest Ensembl: | ENSG00000116661 |
| Gene Name: | F-box protein 2 |
| Gene Alias: | FBG1|FBX2|Fbs1|NFB42|OCP1 |
| Gene Description: | F-box protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(GGCCTTTAAGAG,-,0.00),-33(GCCTTTAAGAGG,-,0.00),-32(CCTTTAAGAGGC,+,0.00) |
