Personal tools

Difference between revisions of "TSS:Hg 103000.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|XPMC2=
 
|XPMC2=
 
|XPMC2H=
 
|XPMC2H=
|all_trans=ENST00000454825.1:0 BC009274:0 AK310164:0 ENST00000478037.1:8 ENST00000371942.8:-11 NR_103995:-11 NM_001279350:-11 NR_103996:-11 NM_020385:-11 AK315904:-11 AK314333:-11 BC071691:12 AK304547:-12 ENST00000494045.5:13 AK025493:22 AL136894:-28 AF273304:-45 AF295774:-45 LF205604:-65 MA441181:-65 ENST00000371935.6:-97 NM_001279349:-97 AM392617:119 DQ891911:123 KJ899305:123 DQ895096:123 CU679283:123 NM_001279351:-173 AK295982:-173 LF346463:180 MA582040:180
+
|all_trans=HGNC:12820
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 24: Line 24:
 
|nearest_refseq=NM_020385
 
|nearest_refseq=NM_020385
 
|nearest_unigene=Hs.438409
 
|nearest_unigene=Hs.438409
|num_trans=31
+
|num_trans=57109
 
|species=human
 
|species=human
 
|start=133417966
 
|start=133417966

Latest revision as of 18:39, 19 July 2021

Basic information about the TSS


TSS ID:hg_103000.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133417966
End:133417999
Strand:-
TSS Score:1
Start of the center position in the TSS region:133417982
End of the center position in the TSS region:133417983



Gene and protein annotation


Transcript_name:ENST00000454825.1 BC009274 AK310164
Distance:0
GeneID:57109
HGNC/MGI_ID:HGNC:12820
UniProt_ID:A0A0C4DG31
Gene_name:REX4 homolog, 3'-5' exonuclease
Gene_symbol:REXO4
Gene_synonyms:hPMC2
Gene_source:HGNC:12820



Transcript annotation


Transcript_name:ENST00000454825.1 BC009274 AK310164
Distance:0
Num_trans:57109
All_trans:HGNC:12820



TATA-Box annotation


Distance to TSS:27
Nearest PromoterID:NM_001279350
Entrez ID:57109
Nearest Unigene:Hs.438409
Nearest Refseq:NM_020385
Nearest Ensembl:ENSG00000148300
Gene Name:REX4 homolog, 3'-5' exonuclease
Gene Alias:REX4|XPMC2|XPMC2H
Gene Description:REX4 homolog, 3'-5' exonuclease
Gene Type:protein-coding
CpG%:0.1
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):