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Difference between revisions of "TSS:Hg 103042.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=S76992:8 AB587478:9 ENST00000406606.7:10 ENST00000371850.8:-29 NM_003371:-29 NM_001134398:-29 BC132965:-29 BC132967:-29 ENST00000486113.1:32 BX640754:127 ENST00000371851.1:-309
+
|all_trans=HGNC:12658
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.145
 
|cpg_percent=0.145
Line 22: Line 22:
 
|nearest_refseq=NM_003371
 
|nearest_refseq=NM_003371
 
|nearest_unigene=Hs.369921
 
|nearest_unigene=Hs.369921
|num_trans=11
+
|num_trans=7410
 
|species=human
 
|species=human
 
|start=133992290
 
|start=133992290

Latest revision as of 18:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_103042.1
Species:human
Chr:chr9
TSS Classification:yes
Start:133992290
End:133992295
Strand:-
TSS Score:1
Start of the center position in the TSS region:133992292
End of the center position in the TSS region:133992293



Gene and protein annotation


Transcript_name:S76992
Distance:8
GeneID:7410
HGNC/MGI_ID:HGNC:12658
UniProt_ID:
Gene_name:vav guanine nucleotide exchange factor 2
Gene_symbol:VAV2
Gene_synonyms:
Gene_source:HGNC:12658



Transcript annotation


Transcript_name:S76992
Distance:8
Num_trans:7410
All_trans:HGNC:12658



TATA-Box annotation


Distance to TSS:31
Nearest PromoterID:NM_001134398
Entrez ID:7410
Nearest Unigene:Hs.369921
Nearest Refseq:NM_003371
Nearest Ensembl:ENSG00000160293
Gene Name:vav guanine nucleotide exchange factor 2
Gene Alias:VAV-2
Gene Description:vav guanine nucleotide exchange factor 2
Gene Type:protein-coding
CpG%:0.145
GC%:0.781095
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):