Difference between revisions of "TSS:Hg 103203.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UNQ643= | |UNQ643= | ||
| − | |all_trans= | + | |all_trans=HGNC:17337 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_198946 | |nearest_refseq=NM_198946 | ||
|nearest_unigene=Hs.522504 | |nearest_unigene=Hs.522504 | ||
| − | |num_trans= | + | |num_trans=158062 |
|species=human | |species=human | ||
|start=136748516 | |start=136748516 | ||
| Line 30: | Line 30: | ||
|strand=- | |strand=- | ||
|tata_box=-32(CCATATAAACGG,+,0.00) | |tata_box=-32(CCATATAAACGG,+,0.00) | ||
| − | |transcript_name=ENST00000341206.9 | + | |transcript_name=ENST00000341206.9 BC062746 AF303084 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103203.1 | |tss_id=hg_103203.1 | ||
Latest revision as of 18:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136748523 |
|---|---|
| End of the center position in the TSS region: | 136748524 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000341206.9 BC062746 AF303084 |
|---|---|
| Distance: | 0 |
| Num_trans: | 158062 |
| All_trans: | HGNC:17337 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_198946 |
| Entrez ID: | 158062 |
| Nearest Unigene: | Hs.522504 |
| Nearest Refseq: | NM_198946 |
| Nearest Ensembl: | ENSG00000267206 |
| Gene Name: | lipocalin 6 |
| Gene Alias: | LCN5|UNQ643|hLcn5 |
| Gene Description: | lipocalin 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CCATATAAACGG,+,0.00) |
