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Difference between revisions of "TSS:Hg 103210.1"

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{{TSSDetail
 
{{TSSDetail
 
|LCN5=
 
|LCN5=
|all_trans=BC130465:-129 BC132714:-129 ENST00000371688.8:-138 HQ258567:167 KJ895524:167 GQ891310:169 NM_178469:-174 AK126902:-174 BC042109:-183 ENST00000612714.1:-438 NM_001345934:-438 AY301268:-438
+
|all_trans=HGNC:27038
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.06
 
|cpg_percent=0.06
Line 23: Line 23:
 
|nearest_refseq=NM_178469
 
|nearest_refseq=NM_178469
 
|nearest_unigene=Hs.323991
 
|nearest_unigene=Hs.323991
|num_trans=12
+
|num_trans=138307
 
|species=human
 
|species=human
 
|start=136758098
 
|start=136758098

Latest revision as of 18:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_103210.1
Species:human
Chr:chr9
TSS Classification:no
Start:136758098
End:136758105
Strand:-
TSS Score:1
Start of the center position in the TSS region:136758101
End of the center position in the TSS region:136758102



Gene and protein annotation


Transcript_name:BC130465 BC132714
Distance:-129
GeneID:138307
HGNC/MGI_ID:HGNC:27038
UniProt_ID:
Gene_name:lipocalin 8
Gene_symbol:LCN8
Gene_synonyms:
Gene_source:HGNC:27038



Transcript annotation


Transcript_name:BC130465 BC132714
Distance:-129
Num_trans:138307
All_trans:HGNC:27038



TATA-Box annotation


Distance to TSS:177
Nearest PromoterID:NM_178469
Entrez ID:138307
Nearest Unigene:Hs.323991
Nearest Refseq:NM_178469
Nearest Ensembl:ENSG00000204001
Gene Name:lipocalin 8
Gene Alias:EP17|LCN5
Gene Description:lipocalin 8
Gene Type:protein-coding
CpG%:0.06
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):