Personal tools

Difference between revisions of "TSS:Hg 10324.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=BC053509:-6 ENST00000418034.1:-17 AY046564:-17 ENST00000376590.9:-45 NM_005957:-45 AK312907:-45 ENST00000641446.1:-83 ENST00000641437.1:-87 ENST00000376486.3:-144 ENST00000642002.1:-184 LF357340:387 MA592917:387 ENST00000376592.6:485 ENST00000376585.6:485 ENST00000431243.6:485 AY046561:485 AY046562:485 AY046563:485
+
|all_trans=HGNC:7436
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_001286
 
|nearest_refseq=NM_001286
 
|nearest_unigene=Hs.193043
 
|nearest_unigene=Hs.193043
|num_trans=18
+
|num_trans=4524
 
|species=human
 
|species=human
 
|start=11805897
 
|start=11805897

Latest revision as of 18:44, 19 July 2021

Basic information about the TSS


TSS ID:hg_10324.1
Species:human
Chr:chr1
TSS Classification:yes
Start:11805897
End:11805919
Strand:-
TSS Score:1
Start of the center position in the TSS region:11805908
End of the center position in the TSS region:11805909



Gene and protein annotation


Transcript_name:BC053509
Distance:-6
GeneID:4524
HGNC/MGI_ID:HGNC:7436
UniProt_ID:
Gene_name:methylenetetrahydrofolate reductase
Gene_symbol:MTHFR
Gene_synonyms:
Gene_source:HGNC:7436



Transcript annotation


Transcript_name:BC053509
Distance:-6
Num_trans:4524
All_trans:HGNC:7436



TATA-Box annotation


Distance to TSS:-188
Nearest PromoterID:NM_001256959
Entrez ID:1185
Nearest Unigene:Hs.193043
Nearest Refseq:NM_001286
Nearest Ensembl:ENSG00000011021
Gene Name:methylenetetrahydrofolate reductase
Gene Alias:CLC-6
Gene Description:chloride voltage-gated channel 6
Gene Type:protein-coding
CpG%:0.105
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):