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Difference between revisions of "TSS:Hg 103431.1"

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Line 2: Line 2:
 
|NGB=
 
|NGB=
 
|NOG1=
 
|NOG1=
|all_trans=AK301721:-12 ENST00000360059.5:-21 AK302219:-226 BC033784:-228 AF325353:-247 KJ898511:-250 ENST00000491635.1:-265 AK097093:-265 AK295231:-265 AK001548:-265 AK222861:-265 BC038975:-268 AF120334:-270 BC021243:-277 BC008683:-280 ENST00000360803.9:-293 NM_012341:-293 AK001552:-318
+
|all_trans=HGNC:21535
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.055
 
|cpg_percent=0.055
Line 24: Line 24:
 
|nearest_refseq=NM_012341
 
|nearest_refseq=NM_012341
 
|nearest_unigene=Hs.215766
 
|nearest_unigene=Hs.215766
|num_trans=18
+
|num_trans=23560
 
|species=human
 
|species=human
 
|start=988726
 
|start=988726

Latest revision as of 18:48, 19 July 2021

Basic information about the TSS


TSS ID:hg_103431.1
Species:human
Chr:chr10
TSS Classification:yes
Start:988726
End:988735
Strand:+
TSS Score:1
Start of the center position in the TSS region:988730
End of the center position in the TSS region:988731



Gene and protein annotation


Transcript_name:AK301721
Distance:-12
GeneID:23560
HGNC/MGI_ID:HGNC:21535
UniProt_ID:
Gene_name:GTP binding protein 4
Gene_symbol:GTPBP4
Gene_synonyms:CRFG FLJ10686 FLJ10690 NGB NOG1
Gene_source:HGNC:21535



Transcript annotation


Transcript_name:AK301721
Distance:-12
Num_trans:23560
All_trans:HGNC:21535



TATA-Box annotation


Distance to TSS:297
Nearest PromoterID:NM_012341
Entrez ID:23560
Nearest Unigene:Hs.215766
Nearest Refseq:NM_012341
Nearest Ensembl:ENSG00000107937
Gene Name:GTP binding protein 4
Gene Alias:CRFG|NGB|NOG1
Gene Description:GTP binding protein 4
Gene Type:protein-coding
CpG%:0.055
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):