Difference between revisions of "TSS:Hg 103848.1"
From referenceTSS
| Line 33: | Line 33: | ||
|start_of_center_position=11005794 | |start_of_center_position=11005794 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001326338 NM_001326339 | + | |transcript_name=NM_001326338.2 NM_001326339.2 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103848.1 | |tss_id=hg_103848.1 | ||
Latest revision as of 18:57, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11005794 |
|---|---|
| End of the center position in the TSS region: | 11005795 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001326338.2 NM_001326339.2 |
|---|---|
| Distance: | -125 |
| Num_trans: | 17 |
| All_trans: | NM_001326338:-125 NM_001326339:-125 ENST00000631816.1:-407 AK299548:-407 ENST00000633200.1:-449 AK297380:-449 ENST00000631460.1:-460 ENST00000416382.6:-463 AF090693:-463 NM_001326336:-472 NM_001326332:-472 NM_001326331:-472 NM_001025077:-472 NM_001326337:-472 NM_001326335:-472 NM_001326334:-472 NM_001326333:-472 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NM_001326339 |
| Entrez ID: | 10659 |
| Nearest Unigene: | Hs.309288 |
| Nearest Refseq: | NM_006561 |
| Nearest Ensembl: | ENSG00000048740 |
| Gene Name: | CUGBP Elav-like family member 2 |
| Gene Alias: | BRUNOL3|CELF-2|CUG-BP2|CUGBP2|ETR-3|ETR3|NAPOR |
| Gene Description: | CUGBP Elav-like family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
