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Difference between revisions of "TSS:Hg 103900.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000420401.5:-24 AK024562:-26 BC009617:-35 AK290902:-41 AK222511:-52 AF289604:-69 AF275677:-86 ENST00000379215.9:-88 NM_024693:-88 KJ899561:97 ENST00000496136.5:-104 HM005699:-113 BC001091:147
+
|all_trans=HGNC:23489
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 22: Line 22:
 
|nearest_refseq=NM_024693
 
|nearest_refseq=NM_024693
 
|nearest_unigene=Hs.22242
 
|nearest_unigene=Hs.22242
|num_trans=13
+
|num_trans=79746
 
|species=human
 
|species=human
 
|start=11742469
 
|start=11742469

Latest revision as of 18:58, 19 July 2021

Basic information about the TSS


TSS ID:hg_103900.1
Species:human
Chr:chr10
TSS Classification:yes
Start:11742469
End:11742480
Strand:+
TSS Score:1
Start of the center position in the TSS region:11742474
End of the center position in the TSS region:11742475



Gene and protein annotation


Transcript_name:ENST00000420401.5
Distance:-24
GeneID:79746
HGNC/MGI_ID:HGNC:23489
UniProt_ID:Q5W0J8
Gene_name:enoyl-CoA hydratase domain containing 3
Gene_symbol:ECHDC3
Gene_synonyms:FLJ20909
Gene_source:HGNC:23489



Transcript annotation


Transcript_name:ENST00000420401.5
Distance:-24
Num_trans:79746
All_trans:HGNC:23489



TATA-Box annotation


Distance to TSS:93
Nearest PromoterID:NM_024693
Entrez ID:79746
Nearest Unigene:Hs.22242
Nearest Refseq:NM_024693
Nearest Ensembl:ENSG00000134463
Gene Name:enoyl-CoA hydratase domain containing 3
Gene Alias:-
Gene Description:enoyl-CoA hydratase domain containing 3
Gene Type:protein-coding
CpG%:0.13
GC%:0.741294
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):