Difference between revisions of "TSS:Hg 103908.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:17702 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018144 | |nearest_refseq=NM_018144 | ||
|nearest_unigene=Hs.112955 | |nearest_unigene=Hs.112955 | ||
| − | |num_trans= | + | |num_trans=55176 |
|species=human | |species=human | ||
|start=12129642 | |start=12129642 | ||
|start_of_center_position=12129681 | |start_of_center_position=12129681 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000441368.5 ENST00000298428.14 ENST00000475268.5 ENST00000495368.1 ENST00000304267.12 ENST00000472221.5 | + | |transcript_name=ENST00000441368.5 ENST00000298428.14 ENST00000475268.5 ENST00000495368.1 ENST00000304267.12 ENST00000472221.5 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103908.1 | |tss_id=hg_103908.1 | ||
Latest revision as of 18:58, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12129681 |
|---|---|
| End of the center position in the TSS region: | 12129682 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000441368.5 ENST00000298428.14 ENST00000475268.5 ENST00000495368.1 ENST00000304267.12 ENST00000472221.5 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640 |
|---|---|
| Distance: | 0 |
| Num_trans: | 55176 |
| All_trans: | HGNC:17702 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_018144 |
| Entrez ID: | 55176 |
| Nearest Unigene: | Hs.112955 |
| Nearest Refseq: | NM_018144 |
| Nearest Ensembl: | ENSG00000065665 |
| Gene Name: | SEC61 translocon subunit alpha 2 |
| Gene Alias: | - |
| Gene Description: | SEC61 translocon alpha 2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
