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Difference between revisions of "TSS:Hg 104056.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|HEL113=
 
|HEL113=
|all_trans=ENST00000497849.1:2 LF205547:53 MA441124:53 ENST00000478746.1:-295 BC066956:-339 ENST00000224237.9:411 ENST00000487938.5:411 AK222507:411 AK222602:411 EU794672:411 AK056766:411 AK091813:411 AK097336:411 AK098444:411 X16478:412 AK222482:413 ENST00000485947.1:424 AF328728:428 BC030573:432 BC000163:432 GQ900939:432 Z19554:437
+
|all_trans=HGNC:12692
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 23: Line 23:
 
|nearest_refseq=NM_003380
 
|nearest_refseq=NM_003380
 
|nearest_unigene=Hs.455493
 
|nearest_unigene=Hs.455493
|num_trans=22
+
|num_trans=7431
 
|species=human
 
|species=human
 
|start=17228809
 
|start=17228809

Latest revision as of 19:01, 19 July 2021

Basic information about the TSS


TSS ID:hg_104056.1
Species:human
Chr:chr10
TSS Classification:yes
Start:17228809
End:17228867
Strand:+
TSS Score:1
Start of the center position in the TSS region:17228838
End of the center position in the TSS region:17228839



Gene and protein annotation


Transcript_name:ENST00000497849.1
Distance:2
GeneID:7431
HGNC/MGI_ID:HGNC:12692
UniProt_ID:A0A1B0GVG8
Gene_name:vimentin
Gene_symbol:VIM
Gene_synonyms:
Gene_source:HGNC:12692



Transcript annotation


Transcript_name:ENST00000497849.1
Distance:2
Num_trans:7431
All_trans:HGNC:12692



TATA-Box annotation


Distance to TSS:597
Nearest PromoterID:NM_003380
Entrez ID:7431
Nearest Unigene:Hs.455493
Nearest Refseq:NM_003380
Nearest Ensembl:ENSG00000026025
Gene Name:vimentin
Gene Alias:-
Gene Description:vimentin
Gene Type:protein-coding
CpG%:0.105
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):