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Difference between revisions of "TSS:Hg 104058.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000469543.5:-190 AK093924:-190 LF346175:-259 MA581752:-259 M25246:-275 LF346174:-358 MA581751:-358 ENST00000421459.2:403 ENST00000637053.1:448 LF346172:-486 MA581749:-486
+
|all_trans=HGNC:12692
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NR_108060
 
|nearest_refseq=NR_108060
 
|nearest_unigene=Hs.740502
 
|nearest_unigene=Hs.740502
|num_trans=11
+
|num_trans=7431
 
|species=human
 
|species=human
 
|start=17230193
 
|start=17230193

Latest revision as of 19:02, 19 July 2021

Basic information about the TSS


TSS ID:hg_104058.1
Species:human
Chr:chr10
TSS Classification:yes
Start:17230193
End:17230206
Strand:+
TSS Score:1
Start of the center position in the TSS region:17230199
End of the center position in the TSS region:17230200



Gene and protein annotation


Transcript_name:ENST00000469543.5 AK093924
Distance:-190
GeneID:7431
HGNC/MGI_ID:HGNC:12692
UniProt_ID:B0YJC5
Gene_name:vimentin
Gene_symbol:VIM
Gene_synonyms:
Gene_source:HGNC:12692



Transcript annotation


Transcript_name:ENST00000469543.5 AK093924
Distance:-190
Num_trans:7431
All_trans:HGNC:12692



TATA-Box annotation


Distance to TSS:-215
Nearest PromoterID:NR_108061
Entrez ID:100507347
Nearest Unigene:Hs.740502
Nearest Refseq:NR_108060
Nearest Ensembl:ENSG00000229124
Gene Name:vimentin
Gene Alias:-
Gene Description:VIM antisense RNA 1
Gene Type:ncRNA
CpG%:0.035
GC%:0.58209
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):