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Difference between revisions of "TSS:Hg 104236.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000417470.1:-57 ENST00000448361.5:-64 ENST00000463688.6:-68 ENST00000463409.6:-77 ENST00000489125.2:-78 ENST00000496071.5:-80 ENST00000472610.5:-81 ENST00000444869.5:-89 AY542159:-91 ENST00000456711.5:-92 ENST00000470045.1:-94 AK295109:-94 KJ893368:-95 ENST00000479958.6:-100 ENST00000602390.5:-100 AF078848:-100 AK128789:-100 AK313235:-100 ENST00000468179.6:-110 BC022898:-113 AF201948:-120 ENST00000376836.8:-121 ENST00000475460.6:-121 NM_012071:-121 ENST00000602574.5:-123 BX647275:-123 NM_001204062:-126 ENST00000468469.5:218
+
|all_trans=HGNC:48326
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 22: Line 22:
 
|nearest_refseq=NM_012071
 
|nearest_refseq=NM_012071
 
|nearest_unigene=Hs.534398
 
|nearest_unigene=Hs.534398
|num_trans=28
+
|num_trans=100532731
 
|species=human
 
|species=human
 
|start=22316508
 
|start=22316508

Latest revision as of 19:05, 19 July 2021

Basic information about the TSS


TSS ID:hg_104236.1
Species:human
Chr:chr10
TSS Classification:yes
Start:22316508
End:22316517
Strand:+
TSS Score:1
Start of the center position in the TSS region:22316512
End of the center position in the TSS region:22316513



Gene and protein annotation


Transcript_name:ENST00000417470.1
Distance:-57
GeneID:100532731
HGNC/MGI_ID:HGNC:48326
UniProt_ID:Q5T8Z1
Gene_name:COMMD3-BMI1 readthrough
Gene_symbol:COMMD3-BMI1
Gene_synonyms:
Gene_source:HGNC:48326



Transcript annotation


Transcript_name:ENST00000417470.1
Distance:-57
Num_trans:100532731
All_trans:HGNC:48326



TATA-Box annotation


Distance to TSS:125
Nearest PromoterID:NM_012071
Entrez ID:23412
Nearest Unigene:Hs.534398
Nearest Refseq:NM_012071
Nearest Ensembl:ENSG00000148444
Gene Name:COMMD3-BMI1 readthrough
Gene Alias:BUP|C10orf8
Gene Description:COMM domain containing 3
Gene Type:protein-coding
CpG%:0.1
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):