Difference between revisions of "TSS:Hg 104998.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TCF6L2= | |TCF6L2= | ||
|TCF6L3= | |TCF6L3= | ||
| − | |all_trans= | + | |all_trans=HGNC:11741 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=218 |
|distance_to_tss=-25 | |distance_to_tss=-25 | ||
|end=58385127 | |end=58385127 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_003201 | |nearest_refseq=NM_003201 | ||
|nearest_unigene=Hs.594250 | |nearest_unigene=Hs.594250 | ||
| − | |num_trans= | + | |num_trans=7019 |
|species=human | |species=human | ||
|start=58385109 | |start=58385109 | ||
|start_of_center_position=58385118 | |start_of_center_position=58385118 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000373899.3 BC029815 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104998.1 | |tss_id=hg_104998.1 | ||
Latest revision as of 19:21, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 58385118 |
|---|---|
| End of the center position in the TSS region: | 58385119 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000373899.3 BC029815 |
|---|---|
| Distance: | 218 |
| Num_trans: | 7019 |
| All_trans: | HGNC:11741 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_001270782 |
| Entrez ID: | 7019 |
| Nearest Unigene: | Hs.594250 |
| Nearest Refseq: | NM_003201 |
| Nearest Ensembl: | ENSG00000108064 |
| Gene Name: | transcription factor A, mitochondrial |
| Gene Alias: | MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3 |
| Gene Description: | transcription factor A, mitochondrial |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
