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Difference between revisions of "TSS:Hg 105002.1"

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Line 6: Line 6:
 
|TCF6L2=
 
|TCF6L2=
 
|TCF6L3=
 
|TCF6L3=
|all_trans=BC126366:0 BC104482:-19 ENST00000373895.7:-23 BC018628:-23 M62810:-41 EU279428:44 ENST00000487519.6:-47 NM_003201:-47 AK312558:-52 HQ258758:66 KJ897655:66 AB451366:72 AB464302:72 CR407653:72 BT019658:72 BT019659:72 AB451241:72 ENST00000373899.3:-112 BC029815:-112 ENST00000395377.2:128 NM_001270782:-314 NR_073073:-314
+
|all_trans=HGNC:11741
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 28: Line 28:
 
|nearest_refseq=NM_003201
 
|nearest_refseq=NM_003201
 
|nearest_unigene=Hs.594250
 
|nearest_unigene=Hs.594250
|num_trans=22
+
|num_trans=7019
 
|species=human
 
|species=human
 
|start=58385456
 
|start=58385456

Latest revision as of 19:22, 19 July 2021

Basic information about the TSS


TSS ID:hg_105002.1
Species:human
Chr:chr10
TSS Classification:yes
Start:58385456
End:58385476
Strand:+
TSS Score:1
Start of the center position in the TSS region:58385466
End of the center position in the TSS region:58385467



Gene and protein annotation


Transcript_name:BC126366
Distance:0
GeneID:7019
HGNC/MGI_ID:HGNC:11741
UniProt_ID:
Gene_name:transcription factor A, mitochondrial
Gene_symbol:TFAM
Gene_synonyms:
Gene_source:HGNC:11741



Transcript annotation


Transcript_name:BC126366
Distance:0
Num_trans:7019
All_trans:HGNC:11741



TATA-Box annotation


Distance to TSS:56
Nearest PromoterID:NM_003201
Entrez ID:7019
Nearest Unigene:Hs.594250
Nearest Refseq:NM_003201
Nearest Ensembl:ENSG00000108064
Gene Name:transcription factor A, mitochondrial
Gene Alias:MTDPS15|MTTF1|MTTFA|TCF6|TCF6L1|TCF6L2|TCF6L3
Gene Description:transcription factor A, mitochondrial
Gene Type:protein-coding
CpG%:0.085
GC%:0.61194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):