Personal tools

Difference between revisions of "TSS:Hg 105057.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|MRF-2=
 
|MRF-2=
 
|MRF2=
 
|MRF2=
|all_trans=ENST00000644638.1:424 AK296921:430 ENST00000681100.1:439 ENST00000279873.12:439 NM_032199:439 BC107800:439 BC056680:440 AB527389:450 BC156570:450 BC152736:450
+
|all_trans=HGNC:17362
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 24: Line 24:
 
|nearest_refseq=NM_032199
 
|nearest_refseq=NM_032199
 
|nearest_unigene=Hs.535297
 
|nearest_unigene=Hs.535297
|num_trans=10
+
|num_trans=84159
 
|species=human
 
|species=human
 
|start=61901245
 
|start=61901245

Latest revision as of 19:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_105057.1
Species:human
Chr:chr10
TSS Classification:yes
Start:61901245
End:61901260
Strand:+
TSS Score:1
Start of the center position in the TSS region:61901252
End of the center position in the TSS region:61901253



Gene and protein annotation


Transcript_name:ENST00000644638.1
Distance:424
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:A0A2R8Y5F2
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:ENST00000644638.1
Distance:424
Num_trans:84159
All_trans:HGNC:17362



TATA-Box annotation


Distance to TSS:-446
Nearest PromoterID:NM_032199
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT|MRF-2|MRF2
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.025
GC%:0.472637
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):