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Difference between revisions of "TSS:Hg 105088.1"

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Line 2: Line 2:
 
|MRF-2=
 
|MRF-2=
 
|MRF2=
 
|MRF2=
|all_trans=BC066345:-12 ENST00000309334.5:-44 BC015120:-44 NM_001244638:75 AK024803:184
+
|all_trans=HGNC:17362
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 24: Line 24:
 
|nearest_refseq=NM_032199
 
|nearest_refseq=NM_032199
 
|nearest_unigene=Hs.535297
 
|nearest_unigene=Hs.535297
|num_trans=5
+
|num_trans=84159
 
|species=human
 
|species=human
 
|start=62049254
 
|start=62049254

Latest revision as of 19:23, 19 July 2021

Basic information about the TSS


TSS ID:hg_105088.1
Species:human
Chr:chr10
TSS Classification:yes
Start:62049254
End:62049282
Strand:+
TSS Score:1
Start of the center position in the TSS region:62049268
End of the center position in the TSS region:62049269



Gene and protein annotation


Transcript_name:BC066345
Distance:-12
GeneID:84159
HGNC/MGI_ID:HGNC:17362
UniProt_ID:
Gene_name:AT-rich interaction domain 5B
Gene_symbol:ARID5B
Gene_synonyms:FLJ21150 MRF2
Gene_source:HGNC:17362



Transcript annotation


Transcript_name:BC066345
Distance:-12
Num_trans:84159
All_trans:HGNC:17362



TATA-Box annotation


Distance to TSS:-89
Nearest PromoterID:NM_001244638
Entrez ID:84159
Nearest Unigene:Hs.535297
Nearest Refseq:NM_032199
Nearest Ensembl:ENSG00000150347
Gene Name:AT-rich interaction domain 5B
Gene Alias:DESRT|MRF-2|MRF2
Gene Description:AT-rich interaction domain 5B
Gene Type:protein-coding
CpG%:0.045
GC%:0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):