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Difference between revisions of "TSS:Hg 105176.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|Yip2b=
 
|Yip2b=
|all_trans=BC068557:423 LF384644:423 MA620221:423 ENST00000373758.5:461 NM_001001330:461 BC057832:468 BC010040:473
+
|all_trans=HGNC:23711
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.05
 
|cpg_percent=0.05
Line 23: Line 23:
 
|nearest_refseq=NM_001001330
 
|nearest_refseq=NM_001001330
 
|nearest_unigene=Hs.499833
 
|nearest_unigene=Hs.499833
|num_trans=7
+
|num_trans=221035
 
|species=human
 
|species=human
 
|start=63520929
 
|start=63520929
 
|start_of_center_position=63520934
 
|start_of_center_position=63520934
 
|strand=+
 
|strand=+
|transcript_name=BC068557 LF384644 MA620221
+
|transcript_name=BC068557
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_105176.1
 
|tss_id=hg_105176.1

Latest revision as of 19:25, 19 July 2021

Basic information about the TSS


TSS ID:hg_105176.1
Species:human
Chr:chr10
TSS Classification:yes
Start:63520929
End:63520940
Strand:+
TSS Score:1
Start of the center position in the TSS region:63520934
End of the center position in the TSS region:63520935



Gene and protein annotation


Transcript_name:BC068557
Distance:423
GeneID:221035
HGNC/MGI_ID:HGNC:23711
UniProt_ID:
Gene_name:receptor accessory protein 3
Gene_symbol:REEP3
Gene_synonyms:Yip2b
Gene_source:HGNC:23711



Transcript annotation


Transcript_name:BC068557
Distance:423
Num_trans:221035
All_trans:HGNC:23711



TATA-Box annotation


Distance to TSS:-466
Nearest PromoterID:NM_001001330
Entrez ID:221035
Nearest Unigene:Hs.499833
Nearest Refseq:NM_001001330
Nearest Ensembl:ENSG00000165476
Gene Name:receptor accessory protein 3
Gene Alias:C10orf74|Yip2b
Gene Description:receptor accessory protein 3
Gene Type:protein-coding
CpG%:0.05
GC%:0.537313
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):