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Difference between revisions of "TSS:Hg 105275.1"

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Line 2: Line 2:
 
|GUB=
 
|GUB=
 
|RH-II/GuB=
 
|RH-II/GuB=
|all_trans=ENST00000483593.5:0 ENST00000373585.8:0 ENST00000471475.1:0 NM_024045:0 BC000272:0 LF384641:0 MA620218:0 AK223297:0 AB051075:0 AF334103:0 AK301431:0 AK293577:0 BC014263:0 CU674120:51 DQ892547:51 DQ895758:51 KJ894630:51 LF322648:491 MA558225:491
+
|all_trans=HGNC:17906
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 25: Line 25:
 
|nearest_refseq=NM_024045
 
|nearest_refseq=NM_024045
 
|nearest_unigene=Hs.522984
 
|nearest_unigene=Hs.522984
|num_trans=19
+
|num_trans=79009
 
|species=human
 
|species=human
 
|start=68901258
 
|start=68901258
 
|start_of_center_position=68901296
 
|start_of_center_position=68901296
 
|strand=+
 
|strand=+
|transcript_name=ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 NM_024045 BC000272 LF384641 MA620218 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
+
|transcript_name=ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_105275.1
 
|tss_id=hg_105275.1

Latest revision as of 19:27, 19 July 2021

Basic information about the TSS


TSS ID:hg_105275.1
Species:human
Chr:chr10
TSS Classification:yes
Start:68901258
End:68901334
Strand:+
TSS Score:1
Start of the center position in the TSS region:68901296
End of the center position in the TSS region:68901297



Gene and protein annotation


Transcript_name:ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
Distance:0
GeneID:79009
HGNC/MGI_ID:HGNC:17906
UniProt_ID:B4DED6 B4DW97 K0J110 Q53FI9 Q9BQ39 S4R3G6 S4R3V4
Gene_name:DExD-box helicase 50
Gene_symbol:DDX50
Gene_synonyms:GU2 GUB MGC3199 RH-II/GuB
Gene_source:HGNC:17906



Transcript annotation


Transcript_name:ENST00000483593.5 ENST00000373585.8 ENST00000471475.1 BC000272 AK223297 AB051075 AF334103 AK301431 AK293577 BC014263
Distance:0
Num_trans:79009
All_trans:HGNC:17906



TATA-Box annotation


Distance to TSS:-19
Nearest PromoterID:NM_024045
Entrez ID:79009
Nearest Unigene:Hs.522984
Nearest Refseq:NM_024045
Nearest Ensembl:ENSG00000107625
Gene Name:DExD-box helicase 50
Gene Alias:GU2|GUB|RH-II/GuB|mcdrh
Gene Description:DExD-box helicase 50
Gene Type:protein-coding
CpG%:0.1
GC%:0.646766
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):