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Difference between revisions of "TSS:Hg 105620.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000344036.8:15 LF384970:-80 MA620547:-80 ENST00000332211.10:121 ENST00000472137.5:145 ENST00000470745.5:174 BC000165:175 ENST00000475142.5:183 ENST00000481876.5:184 BC072407:185 AK315919:199 AK296635:205 BC012883:217 ENST00000313132.8:218 L08666:218 ENST00000498394.5:226 ENST00000468285.1:234 LF333488:266 MA569065:266 ENST00000447677.5:404 LF333487:-434 MA569064:-434 ENST00000298468.9:-468 ENST00000543351.5:-468 NM_001184823:-468 NM_001184783:-468 NM_001324089:-468 NM_001324090:-468 NM_001324088:-468 NM_001324087:-468 NM_003375:-468
+
|all_trans=HGNC:12672
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 22: Line 22:
 
|nearest_refseq=NM_003375
 
|nearest_refseq=NM_003375
 
|nearest_unigene=Hs.355927
 
|nearest_unigene=Hs.355927
|num_trans=31
+
|num_trans=7417
 
|species=human
 
|species=human
 
|start=75210621
 
|start=75210621

Latest revision as of 19:35, 19 July 2021

Basic information about the TSS


TSS ID:hg_105620.1
Species:human
Chr:chr10
TSS Classification:yes
Start:75210621
End:75210630
Strand:+
TSS Score:1
Start of the center position in the TSS region:75210625
End of the center position in the TSS region:75210626



Gene and protein annotation


Transcript_name:ENST00000344036.8
Distance:15
GeneID:7417
HGNC/MGI_ID:HGNC:12672
UniProt_ID:Q5JSD2
Gene_name:voltage dependent anion channel 2
Gene_symbol:VDAC2
Gene_synonyms:
Gene_source:HGNC:12672



Transcript annotation


Transcript_name:ENST00000344036.8
Distance:15
Num_trans:7417
All_trans:HGNC:12672



TATA-Box annotation


Distance to TSS:472
Nearest PromoterID:NM_001184823
Entrez ID:7417
Nearest Unigene:Hs.355927
Nearest Refseq:NM_003375
Nearest Ensembl:ENSG00000165637
Gene Name:voltage dependent anion channel 2
Gene Alias:POR
Gene Description:voltage dependent anion channel 2
Gene Type:protein-coding
CpG%:0.085
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):