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Difference between revisions of "TSS:Hg 105622.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000447677.5:0 L06328:108 LF333488:-109 MA569065:-109 CU687220:121 KJ892371:121 GQ891299:122 ENST00000468285.1:-141 ENST00000498394.5:-149 ENST00000313132.8:-157 L08666:-157 BC012883:-158 AK296635:-170 AK315919:-176 BC072407:-190 ENST00000481876.5:-191 ENST00000475142.5:-192 BC000165:-200 ENST00000470745.5:-201 ENST00000472137.5:-230 ENST00000332211.10:-254 ENST00000344036.8:-360 ENST00000413289.1:419 LF384970:-463 MA620547:-463
+
|all_trans=HGNC:12672
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.11
 
|cpg_percent=0.11
Line 22: Line 22:
 
|nearest_refseq=NM_003375
 
|nearest_refseq=NM_003375
 
|nearest_unigene=Hs.355927
 
|nearest_unigene=Hs.355927
|num_trans=25
+
|num_trans=7417
 
|species=human
 
|species=human
 
|start=75211004
 
|start=75211004

Latest revision as of 19:35, 19 July 2021

Basic information about the TSS


TSS ID:hg_105622.1
Species:human
Chr:chr10
TSS Classification:yes
Start:75211004
End:75211037
Strand:+
TSS Score:1
Start of the center position in the TSS region:75211020
End of the center position in the TSS region:75211021



Gene and protein annotation


Transcript_name:ENST00000447677.5
Distance:0
GeneID:7417
HGNC/MGI_ID:HGNC:12672
UniProt_ID:Q5JSD1
Gene_name:voltage dependent anion channel 2
Gene_symbol:VDAC2
Gene_synonyms:
Gene_source:HGNC:12672



Transcript annotation


Transcript_name:ENST00000447677.5
Distance:0
Num_trans:7417
All_trans:HGNC:12672



TATA-Box annotation


Distance to TSS:867
Nearest PromoterID:NM_001184823
Entrez ID:7417
Nearest Unigene:Hs.355927
Nearest Refseq:NM_003375
Nearest Ensembl:ENSG00000165637
Gene Name:voltage dependent anion channel 2
Gene Alias:POR
Gene Description:voltage dependent anion channel 2
Gene Type:protein-coding
CpG%:0.11
GC%:0.736318
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):