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Difference between revisions of "TSS:Hg 105850.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000660450.1:-25 KY952902:-177 ENST00000671081.1:211 ENST00000422847.1:293 NR_038464:293 BC048265:293
+
|all_trans=HGNC:45114
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.045
 
|cpg_percent=0.045
Line 22: Line 22:
 
|nearest_refseq=NR_038464
 
|nearest_refseq=NR_038464
 
|nearest_unigene=Hs.365566
 
|nearest_unigene=Hs.365566
|num_trans=6
+
|num_trans=439990
 
|species=human
 
|species=human
 
|start=80207396
 
|start=80207396

Latest revision as of 19:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_105850.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80207396
End:80207417
Strand:+
TSS Score:1
Start of the center position in the TSS region:80207406
End of the center position in the TSS region:80207407



Gene and protein annotation


Transcript_name:ENST00000660450.1
Distance:-25
GeneID:439990
HGNC/MGI_ID:HGNC:45114
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 857
Gene_symbol:LINC00857
Gene_synonyms:HUMT
Gene_source:HGNC:45114



Transcript annotation


Transcript_name:ENST00000660450.1
Distance:-25
Num_trans:439990
All_trans:HGNC:45114



TATA-Box annotation


Distance to TSS:-303
Nearest PromoterID:NR_038464
Entrez ID:439990
Nearest Unigene:Hs.365566
Nearest Refseq:NR_038464
Nearest Ensembl:ENSG00000237523
Gene Name:long intergenic non-protein coding RNA 857
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 857
Gene Type:ncRNA
CpG%:0.045
GC%:0.587065
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):