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Difference between revisions of "TSS:Hg 105858.1"

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{{TSSDetail
 
{{TSSDetail
 
|PAMM=
 
|PAMM=
|all_trans=AK315440:0 AY359059:0 ENST00000606162.6:-29 NM_001243781:-29 NM_032333:-29 AK074643:-38 LF210018:-51 MA445595:-51 ENST00000372185.5:-86 AK075447:-86 ENST00000615554.4:-94 NM_001243780:-94 LF212565:-124 MA448142:-124
+
|all_trans=HGNC:28651
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.13
 
|cpg_percent=0.13
Line 23: Line 23:
 
|nearest_refseq=NM_032333
 
|nearest_refseq=NM_032333
 
|nearest_unigene=Hs.500333
 
|nearest_unigene=Hs.500333
|num_trans=14
+
|num_trans=84293
 
|species=human
 
|species=human
 
|start=80408579
 
|start=80408579

Latest revision as of 19:40, 19 July 2021

Basic information about the TSS


TSS ID:hg_105858.1
Species:human
Chr:chr10
TSS Classification:yes
Start:80408579
End:80408623
Strand:+
TSS Score:1
Start of the center position in the TSS region:80408601
End of the center position in the TSS region:80408602



Gene and protein annotation


Transcript_name:AK315440 AY359059
Distance:0
GeneID:84293
HGNC/MGI_ID:HGNC:28651
UniProt_ID:
Gene_name:peroxiredoxin like 2A
Gene_symbol:PRXL2A
Gene_synonyms:Adrx MGC4248 PAMM
Gene_source:HGNC:28651



Transcript annotation


Transcript_name:AK315440 AY359059
Distance:0
Num_trans:84293
All_trans:HGNC:28651



TATA-Box annotation


Distance to TSS:50
Nearest PromoterID:NM_001243781
Entrez ID:84293
Nearest Unigene:Hs.500333
Nearest Refseq:NM_032333
Nearest Ensembl:ENSG00000122378
Gene Name:peroxiredoxin like 2A
Gene Alias:Adrx|C10orf58|FAM213A|PAMM
Gene Description:peroxiredoxin like 2A
Gene Type:protein-coding
CpG%:0.13
GC%:0.751244
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):