Difference between revisions of "TSS:Hg 106012.1"
From referenceTSS
| Line 2: | Line 2: | ||
|APM2= | |APM2= | ||
|C10orf116= | |C10orf116= | ||
| − | |all_trans= | + | |all_trans=HGNC:24043 |
|apM-2= | |apM-2= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_006829 | |nearest_refseq=NM_006829 | ||
|nearest_unigene=Hs.642660 | |nearest_unigene=Hs.642660 | ||
| − | |num_trans= | + | |num_trans=10974 |
|species=human | |species=human | ||
|start=86968473 | |start=86968473 | ||
| Line 31: | Line 31: | ||
|strand=+ | |strand=+ | ||
|tata_box=-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00) | |tata_box=-34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00) | ||
| − | |transcript_name=ENST00000372013.8 | + | |transcript_name=ENST00000372013.8 AK312031 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106012.1 | |tss_id=hg_106012.1 | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86968480 |
|---|---|
| End of the center position in the TSS region: | 86968481 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000372013.8 AK312031 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10974 |
| All_trans: | HGNC:24043 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_006829 |
| Entrez ID: | 10974 |
| Nearest Unigene: | Hs.642660 |
| Nearest Refseq: | NM_006829 |
| Nearest Ensembl: | ENSG00000148671 |
| Gene Name: | adipogenesis regulatory factor |
| Gene Alias: | AFRO|APM2|C10orf116|apM-2 |
| Gene Description: | adipogenesis regulatory factor |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CGCCTTAAAAAC,-,0.00),-32(CCTTAAAAACCG,+,0.00) |
