Difference between revisions of "TSS:Hg 106015.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:23436 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001146157 | |nearest_refseq=NM_001146157 | ||
|nearest_unigene=Hs.729945 | |nearest_unigene=Hs.729945 | ||
| − | |num_trans= | + | |num_trans=643161 |
|species=human | |species=human | ||
|start=87020292 | |start=87020292 | ||
| Line 28: | Line 28: | ||
|strand=+ | |strand=+ | ||
|tata_box=-31(AGCTATAAAAGC,-,0.00) | |tata_box=-31(AGCTATAAAAGC,-,0.00) | ||
| − | |transcript_name=ENST00000343959.5 | + | |transcript_name=ENST00000343959.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106015.1 | |tss_id=hg_106015.1 | ||
Latest revision as of 19:43, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 87020293 |
|---|---|
| End of the center position in the TSS region: | 87020294 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000343959.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 643161 |
| All_trans: | HGNC:23436 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001146157 |
| Entrez ID: | 643161 |
| Nearest Unigene: | Hs.729945 |
| Nearest Refseq: | NM_001146157 |
| Nearest Ensembl: | ENSG00000188100 |
| Gene Name: | family with sequence similarity 25 member A |
| Gene Alias: | bA96C23.5 |
| Gene Description: | family with sequence similarity 25 member A |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -31(AGCTATAAAAGC,-,0.00) |
