Personal tools

Difference between revisions of "TSS:Hg 106026.1"

From referenceTSS

Jump to: navigation, search
 
Line 2: Line 2:
 
|BCYM4=
 
|BCYM4=
 
|SK2=
 
|SK2=
|all_trans=AF074331:0 AF091242:-10 AF150754:-10 AF173365:13 ENST00000456849.2:-33 NM_004670:-33 NM_001015880:-33 AK312556:-33 BC009894:-40 GQ891452:-40 DQ893625:56 DQ895430:56 KJ905366:59 KR710243:59 KR710244:59 AF313907:61 ENST00000361175.8:-298 ENST00000465996.5:436
+
|all_trans=HGNC:8604
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.1
 
|cpg_percent=0.1
Line 24: Line 24:
 
|nearest_refseq=NM_004670
 
|nearest_refseq=NM_004670
 
|nearest_unigene=Hs.524491
 
|nearest_unigene=Hs.524491
|num_trans=18
+
|num_trans=9060
 
|species=human
 
|species=human
 
|start=87659910
 
|start=87659910

Latest revision as of 19:43, 19 July 2021

Basic information about the TSS


TSS ID:hg_106026.1
Species:human
Chr:chr10
TSS Classification:yes
Start:87659910
End:87659921
Strand:+
TSS Score:1
Start of the center position in the TSS region:87659915
End of the center position in the TSS region:87659916



Gene and protein annotation


Transcript_name:AF074331
Distance:0
GeneID:9060
HGNC/MGI_ID:HGNC:8604
UniProt_ID:
Gene_name:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene_symbol:PAPSS2
Gene_synonyms:ATPSK2
Gene_source:HGNC:8604



Transcript annotation


Transcript_name:AF074331
Distance:0
Num_trans:9060
All_trans:HGNC:8604



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_004670
Entrez ID:9060
Nearest Unigene:Hs.524491
Nearest Refseq:NM_004670
Nearest Ensembl:ENSG00000198682
Gene Name:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene Alias:ATPSK2|BCYM4|SK2
Gene Description:3'-phosphoadenosine 5'-phosphosulfate synthase 2
Gene Type:protein-coding
CpG%:0.1
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-68(CTTTTTATACCT,+,0.00)