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Difference between revisions of "TSS:Hg 106298.1"

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Line 6: Line 6:
 
|ETL1=
 
|ETL1=
 
|IB1099=
 
|IB1099=
|all_trans=ENST00000637925.1:0 ENST00000636155.1:0 ENST00000636946.1:-11 ENST00000630047.2:-21 ENST00000637689.1:-21 ENST00000637037.1:-21 ENST00000638049.1:-21 AK303956:-21 ENST00000636232.1:-24 AY358885:-29 ENST00000635953.1:-30 ENST00000637611.1:-30 ENST00000627699.1:43 ENST00000630184.2:-54 ENST00000636754.1:-56 ENST00000371418.9:-56 NM_005097:-56 AK309416:-57 AF055636:-71 AF473548:-71 ENST00000478763.2:-79 AK289706:100 BC022500:-107 CU692658:110 KJ892713:110 KR709465:110 KR709466:110 KR709467:110 KR709468:110 DQ892371:111 DQ895580:111 ENST00000371413.4:112 KU178468:112 KU178469:112 KU178470:112 KU178471:112 ENST00000630487.2:-117 ENST00000629035.2:-141 ENST00000627420.2:-152 NM_001308276:-183 NM_001308275:-183 NR_131777:-183
+
|all_trans=HGNC:6572
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 28: Line 28:
 
|nearest_refseq=NM_005097
 
|nearest_refseq=NM_005097
 
|nearest_unigene=Hs.533670
 
|nearest_unigene=Hs.533670
|num_trans=42
+
|num_trans=9211
 
|species=human
 
|species=human
 
|start=93757991
 
|start=93757991

Latest revision as of 19:50, 19 July 2021

Basic information about the TSS


TSS ID:hg_106298.1
Species:human
Chr:chr10
TSS Classification:yes
Start:93757991
End:93758033
Strand:+
TSS Score:1
Start of the center position in the TSS region:93758012
End of the center position in the TSS region:93758013



Gene and protein annotation


Transcript_name:ENST00000637925.1 ENST00000636155.1
Distance:0
GeneID:9211
HGNC/MGI_ID:HGNC:6572
UniProt_ID:A0A1B0GTM5 A0A1B0GV33
Gene_name:leucine rich glioma inactivated 1
Gene_symbol:LGI1
Gene_synonyms:EPITEMPIN ETL1 IB1099
Gene_source:HGNC:6572



Transcript annotation


Transcript_name:ENST00000637925.1 ENST00000636155.1
Distance:0
Num_trans:9211
All_trans:HGNC:6572



TATA-Box annotation


Distance to TSS:76
Nearest PromoterID:NM_005097
Entrez ID:9211
Nearest Unigene:Hs.533670
Nearest Refseq:NM_005097
Nearest Ensembl:ENSG00000108231
Gene Name:leucine rich glioma inactivated 1
Gene Alias:ADLTE|ADPAEF|ADPEAF|EPITEMPIN|EPT|ETL1|IB1099
Gene Description:leucine rich glioma inactivated 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.512438
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):