Difference between revisions of "TSS:Hg 107643.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PTPE= | |PTPE= | ||
|R-PTP-EPSILON= | |R-PTP-EPSILON= | ||
| − | |all_trans= | + | |all_trans=HGNC:9669 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006504 | |nearest_refseq=NM_006504 | ||
|nearest_unigene=Hs.127022 | |nearest_unigene=Hs.127022 | ||
| − | |num_trans= | + | |num_trans=5791 |
|species=human | |species=human | ||
|start=127987272 | |start=127987272 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=-33(TCCTATATAAAC,-,0.00) | |tata_box=-33(TCCTATATAAAC,-,0.00) | ||
| − | |transcript_name= | + | |transcript_name=AK291828 AK300613 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107643.1 | |tss_id=hg_107643.1 | ||
Latest revision as of 20:19, 19 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 127987279 |
|---|---|
| End of the center position in the TSS region: | 127987280 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK291828 AK300613 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5791 |
| All_trans: | HGNC:9669 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001316677 |
| Entrez ID: | 5791 |
| Nearest Unigene: | Hs.127022 |
| Nearest Refseq: | NM_006504 |
| Nearest Ensembl: | ENSG00000132334 |
| Gene Name: | protein tyrosine phosphatase receptor type E |
| Gene Alias: | HPTPE|PTPE|R-PTP-EPSILON |
| Gene Description: | protein tyrosine phosphatase receptor type E |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(TCCTATATAAAC,-,0.00) |
