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Difference between revisions of "TSS:Hg 111739.1"

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Line 11: Line 11:
 
|TK14=
 
|TK14=
 
|TK25=
 
|TK25=
|all_trans=ENST00000336553.10:-15 M35718:-17 ENST00000457416.6:-22 M97193:-22 BC096749:-29 ENST00000604236.5:-32 ENST00000360144.7:-51 AK026508:-51 ENST00000358487.10:-63 ENST00000369060.8:63 ENST00000359354.6:63 NM_000141:-63 NM_001144917:-63 NR_073009:-63 NM_001144918:-63 NM_001320658:-63 NM_001144919:-63 M87771:63 ENST00000369059.5:-71 ENST00000613048.4:-77 ENST00000356226.8:-77 NM_022970:-77 BC039243:-77 ENST00000369058.7:127 AB030073:127 M80634:127 AB030075:127 AB030074:127 AB030076:127 AB030077:127 AB030078:127 M87772:275 M87770:277 ENST00000490349.5:289 U11814:289 X52832:371 ENST00000636922.1:395
+
|all_trans=HGNC:3689
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.195
 
|cpg_percent=0.195
Line 33: Line 33:
 
|nearest_refseq=NM_000141
 
|nearest_refseq=NM_000141
 
|nearest_unigene=Hs.533683
 
|nearest_unigene=Hs.533683
|num_trans=37
+
|num_trans=2263
 
|species=human
 
|species=human
 
|start=121598360
 
|start=121598360

Latest revision as of 21:47, 19 July 2021

Basic information about the TSS


TSS ID:hg_111739.1
Species:human
Chr:chr10
TSS Classification:yes
Start:121598360
End:121598381
Strand:-
TSS Score:1
Start of the center position in the TSS region:121598370
End of the center position in the TSS region:121598371



Gene and protein annotation


Transcript_name:ENST00000336553.10
Distance:-15
GeneID:2263
HGNC/MGI_ID:HGNC:3689
UniProt_ID:H7BXU9
Gene_name:fibroblast growth factor receptor 2
Gene_symbol:FGFR2
Gene_synonyms:CD332 CEK3 ECT1 K-SAM TK14 TK25
Gene_source:HGNC:3689



Transcript annotation


Transcript_name:ENST00000336553.10
Distance:-15
Num_trans:2263
All_trans:HGNC:3689



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NR_073009
Entrez ID:2263
Nearest Unigene:Hs.533683
Nearest Refseq:NM_000141
Nearest Ensembl:ENSG00000066468
Gene Name:fibroblast growth factor receptor 2
Gene Alias:BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25
Gene Description:fibroblast growth factor receptor 2
Gene Type:protein-coding
CpG%:0.195
GC%:0.850746
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):