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Difference between revisions of "TSS:Hg 114450.1"

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Line 5: Line 5:
 
|MS4A4=
 
|MS4A4=
 
|MS4A7=
 
|MS4A7=
|all_trans=ENST00000532114.6:0 ENST00000529991.2:16 ENST00000679988.1:33 AK292089:42 ENST00000343968.8:112 AK075081:112 ENST00000529950.2:122 ENST00000681157.1:122 ENST00000337908.5:122 NM_148975:122 NM_001243266:122 NM_024021:122 BC020648:122 ENST00000527056.5:125 CU676600:130 KJ893892:130 DQ891395:131 DQ894573:131 AB022821:132 AK314033:154 AB013102:157
+
|all_trans=HGNC:13371
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 27: Line 27:
 
|nearest_refseq=NM_024021
 
|nearest_refseq=NM_024021
 
|nearest_unigene=Hs.325960
 
|nearest_unigene=Hs.325960
|num_trans=21
+
|num_trans=51338
 
|species=human
 
|species=human
 
|start=60280531
 
|start=60280531

Latest revision as of 22:46, 19 July 2021

Basic information about the TSS


TSS ID:hg_114450.1
Species:human
Chr:chr11
TSS Classification:yes
Start:60280531
End:60280544
Strand:+
TSS Score:1
Start of the center position in the TSS region:60280537
End of the center position in the TSS region:60280538



Gene and protein annotation


Transcript_name:ENST00000532114.6
Distance:0
GeneID:51338
HGNC/MGI_ID:HGNC:13371
UniProt_ID:Q96JQ5
Gene_name:membrane spanning 4-domains A4A
Gene_symbol:MS4A4A
Gene_synonyms:CD20L1 MS4A7
Gene_source:HGNC:13371



Transcript annotation


Transcript_name:ENST00000532114.6
Distance:0
Num_trans:51338
All_trans:HGNC:13371



TATA-Box annotation


Distance to TSS:-128
Nearest PromoterID:NM_001243266
Entrez ID:51338
Nearest Unigene:Hs.325960
Nearest Refseq:NM_024021
Nearest Ensembl:ENSG00000110079
Gene Name:membrane spanning 4-domains A4A
Gene Alias:4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7
Gene Description:membrane spanning 4-domains A4A
Gene Type:protein-coding
CpG%:0.01
GC%:0.412935
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-32(CGATATAAAAGA,-,0.00)