Personal tools

Difference between revisions of "TSS:Hg 114452.1"

From referenceTSS

Jump to: navigation, search
 
Line 5: Line 5:
 
|MS4A4=
 
|MS4A4=
 
|MS4A7=
 
|MS4A7=
|all_trans=AK292089:0 ENST00000679988.1:-4 ENST00000529991.2:-21 ENST00000532114.6:-40 ENST00000343968.8:66 AK075081:66 ENST00000529950.2:76 ENST00000681157.1:76 ENST00000337908.5:76 NM_148975:76 NM_001243266:76 NM_024021:76 BC020648:76 ENST00000527056.5:79 CU676600:84 KJ893892:84 DQ891395:85 DQ894573:85 AB022821:86 AK314033:108 AB013102:111
+
|all_trans=HGNC:13371
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 27: Line 27:
 
|nearest_refseq=NM_024021
 
|nearest_refseq=NM_024021
 
|nearest_unigene=Hs.325960
 
|nearest_unigene=Hs.325960
|num_trans=21
+
|num_trans=51338
 
|species=human
 
|species=human
 
|start=60280580
 
|start=60280580

Latest revision as of 22:46, 19 July 2021

Basic information about the TSS


TSS ID:hg_114452.1
Species:human
Chr:chr11
TSS Classification:yes
Start:60280580
End:60280590
Strand:+
TSS Score:1
Start of the center position in the TSS region:60280585
End of the center position in the TSS region:60280586



Gene and protein annotation


Transcript_name:AK292089
Distance:0
GeneID:51338
HGNC/MGI_ID:HGNC:13371
UniProt_ID:A8K7S4
Gene_name:membrane spanning 4-domains A4A
Gene_symbol:MS4A4A
Gene_synonyms:CD20L1 MS4A7
Gene_source:HGNC:13371



Transcript annotation


Transcript_name:AK292089
Distance:0
Num_trans:51338
All_trans:HGNC:13371



TATA-Box annotation


Distance to TSS:-81
Nearest PromoterID:NM_001243266
Entrez ID:51338
Nearest Unigene:Hs.325960
Nearest Refseq:NM_024021
Nearest Ensembl:ENSG00000110079
Gene Name:membrane spanning 4-domains A4A
Gene Alias:4SPAN1|CD20-L1|CD20L1|HDCME31P|MS4A4|MS4A7
Gene Description:membrane spanning 4-domains A4A
Gene Type:protein-coding
CpG%:0.01
GC%:0.447761
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):-79(CGATATAAAAGA,-,0.00)