Difference between revisions of "TSS:Hg 117955.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7517 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005961 | |nearest_refseq=NM_005961 | ||
|nearest_unigene=Hs.528432 | |nearest_unigene=Hs.528432 | ||
| − | |num_trans= | + | |num_trans=4588 |
|species=human | |species=human | ||
|start=1036824 | |start=1036824 | ||
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tata_box=79(GCCTATATAAGG,-,0.00) | |tata_box=79(GCCTATATAAGG,-,0.00) | ||
| − | |transcript_name=ENST00000421673.7 | + | |transcript_name=ENST00000421673.7 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_117955.1 | |tss_id=hg_117955.1 | ||
Latest revision as of 00:03, 20 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1036829 |
|---|---|
| End of the center position in the TSS region: | 1036830 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000421673.7 |
|---|---|
| Distance: | 107 |
| Num_trans: | 4588 |
| All_trans: | HGNC:7517 |
TATA-Box annotation
| Distance to TSS: | -111 |
|---|---|
| Nearest PromoterID: | NM_005961 |
| Entrez ID: | 4588 |
| Nearest Unigene: | Hs.528432 |
| Nearest Refseq: | NM_005961 |
| Nearest Ensembl: | ENSG00000184956 |
| Gene Name: | mucin 6, oligomeric mucus/gel-forming |
| Gene Alias: | MUC-6 |
| Gene Description: | mucin 6, oligomeric mucus/gel-forming |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 79(GCCTATATAAGG,-,0.00) |
