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Difference between revisions of "TSS:Hg 118088.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC106078:-6 LF370702:175 MA606279:175 ENST00000442037.5:-209 ENST00000431095.7:-298 BC010185:376 LF370700:423 MA606277:423 BC106079:435 LF370706:-436 MA606283:-436 ENST00000447298.2:-485 LF370699:500 MA606276:500
+
|all_trans=HGNC:4713
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 23: Line 23:
 
|nearest_refseq=NR_030533
 
|nearest_refseq=NR_030533
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=14
+
|num_trans=283120
 
|species=human
 
|species=human
 
|start=1995948
 
|start=1995948

Latest revision as of 00:06, 20 July 2021

Basic information about the TSS


TSS ID:hg_118088.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1995948
End:1995982
Strand:-
TSS Score:1
Start of the center position in the TSS region:1995965
End of the center position in the TSS region:1995966



Gene and protein annotation


Transcript_name:BC106078
Distance:-6
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:
Gene_name:H19 imprinted maternally expressed transcript
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:BC106078
Distance:-6
Num_trans:283120
All_trans:HGNC:4713



TATA-Box annotation


Distance to TSS:866
Nearest PromoterID:NR_030533
Entrez ID:100033819
Nearest Unigene:
Nearest Refseq:NR_030533
Nearest Ensembl:ENSG00000284010
Gene Name:H19 imprinted maternally expressed transcript
Gene Alias:MIRN675|hsa-mir-675
Gene Description:microRNA 675
Gene Type:ncRNA
CpG%:0.02
GC%:0.557214
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):