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Difference between revisions of "TSS:Hg 118096.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000442037.5:18 ENST00000431095.7:-56 LF370706:-194 MA606283:-194 BC106078:221 ENST00000447298.2:-243 ENST00000436715.5:-347 LF370707:-368 MA606284:-368 BC009853:-369 AK123560:-377 LC106311:-424 LF370702:435 MA606279:435 BC013067:-481
+
|all_trans=HGNC:4713
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 23: Line 23:
 
|nearest_refseq=NR_030533
 
|nearest_refseq=NR_030533
 
|nearest_unigene=
 
|nearest_unigene=
|num_trans=15
+
|num_trans=283120
 
|species=human
 
|species=human
 
|start=1996208
 
|start=1996208

Latest revision as of 00:06, 20 July 2021

Basic information about the TSS


TSS ID:hg_118096.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1996208
End:1996224
Strand:-
TSS Score:1
Start of the center position in the TSS region:1996216
End of the center position in the TSS region:1996217



Gene and protein annotation


Transcript_name:ENST00000442037.5
Distance:18
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:
Gene_name:H19 imprinted maternally expressed transcript
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:ENST00000442037.5
Distance:18
Num_trans:283120
All_trans:HGNC:4713



TATA-Box annotation


Distance to TSS:615
Nearest PromoterID:NR_030533
Entrez ID:100033819
Nearest Unigene:
Nearest Refseq:NR_030533
Nearest Ensembl:ENSG00000284010
Gene Name:H19 imprinted maternally expressed transcript
Gene Alias:MIRN675|hsa-mir-675
Gene Description:microRNA 675
Gene Type:ncRNA
CpG%:0.075
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):