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Difference between revisions of "TSS:Hg 119525.1"

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{{TSSDetail
 
{{TSSDetail
 
|WDR94=
 
|WDR94=
|all_trans=ENST00000526606.1:115 ENST00000528950.1:195 AK304530:205 NM_001300731:217 NM_001367469:217 NM_001367470:217 NM_001267783:217 NM_001267782:217 NM_001367471:217 ENST00000534300.5:219 AB051523:219 AK000301:221 AK057896:227 LF348016:238 MA583593:238 ENST00000531542.1:242 ENST00000533727.5:292 AL834190:292
+
|all_trans=HGNC:25990
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 23: Line 23:
 
|nearest_refseq=NM_017749
 
|nearest_refseq=NM_017749
 
|nearest_unigene=Hs.654644
 
|nearest_unigene=Hs.654644
|num_trans=18
+
|num_trans=55626
 
|species=human
 
|species=human
 
|start=46594239
 
|start=46594239

Latest revision as of 00:37, 20 July 2021

Basic information about the TSS


TSS ID:hg_119525.1
Species:human
Chr:chr11
TSS Classification:no
Start:46594239
End:46594242
Strand:-
TSS Score:1
Start of the center position in the TSS region:46594240
End of the center position in the TSS region:46594241



Gene and protein annotation


Transcript_name:ENST00000526606.1
Distance:115
GeneID:55626
HGNC/MGI_ID:HGNC:25990
UniProt_ID:E9PL55
Gene_name:autophagy and beclin 1 regulator 1
Gene_symbol:AMBRA1
Gene_synonyms:DCAF3 FLJ20294 KIAA1736 WDR94
Gene_source:HGNC:25990



Transcript annotation


Transcript_name:ENST00000526606.1
Distance:115
Num_trans:55626
All_trans:HGNC:25990



TATA-Box annotation


Distance to TSS:-218
Nearest PromoterID:NM_001367471
Entrez ID:55626
Nearest Unigene:Hs.654644
Nearest Refseq:NM_017749
Nearest Ensembl:ENSG00000110497
Gene Name:autophagy and beclin 1 regulator 1
Gene Alias:DCAF3|WDR94
Gene Description:autophagy and beclin 1 regulator 1
Gene Type:protein-coding
CpG%:0.035
GC%:0.437811
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):