Difference between revisions of "TSS:Hg 12228.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TCL5= | |TCL5= | ||
| − | |all_trans= | + | |all_trans=HGNC:11556 |
|bHLHa17= | |bHLHa17= | ||
|chr=chr1 | |chr=chr1 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_003189 | |nearest_refseq=NM_003189 | ||
|nearest_unigene=Hs.705618 | |nearest_unigene=Hs.705618 | ||
| − | |num_trans= | + | |num_trans=6886 |
|species=human | |species=human | ||
|start=47232209 | |start=47232209 | ||
| Line 31: | Line 31: | ||
|tal-1= | |tal-1= | ||
|tata_box=72(CTTTTTCTAGGG,+,0.00) | |tata_box=72(CTTTTTCTAGGG,+,0.00) | ||
| − | |transcript_name=ENST00000464796.5 | + | |transcript_name=ENST00000464796.5 S53678 S53686 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_12228.1 | |tss_id=hg_12228.1 | ||
Latest revision as of 01:38, 20 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47232223 |
|---|---|
| End of the center position in the TSS region: | 47232224 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000464796.5 S53678 S53686 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6886 |
| All_trans: | HGNC:11556 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001290406 |
| Entrez ID: | 6886 |
| Nearest Unigene: | Hs.705618 |
| Nearest Refseq: | NM_003189 |
| Nearest Ensembl: | ENSG00000162367 |
| Gene Name: | TAL bHLH transcription factor 1, erythroid differentiation factor |
| Gene Alias: | SCL|TCL5|bHLHa17|tal-1 |
| Gene Description: | TAL bHLH transcription factor 1, erythroid differentiation factor |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 72(CTTTTTCTAGGG,+,0.00) |
