Personal tools

Difference between revisions of "TSS:Hg 134516.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|L21=
 
|L21=
|all_trans=ENST00000326092.8:-118 ENST00000319826.8:-132 ENST00000272274.8:-136 L25348:-146 ENST00000461690.5:-154 NM_000982:-160 ENST00000473558.5:-353 ENST00000311549.10:-406
+
|all_trans=HGNC:10313
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.08
 
|cpg_percent=0.08
Line 23: Line 23:
 
|nearest_refseq=NM_000982
 
|nearest_refseq=NM_000982
 
|nearest_unigene=Hs.381123
 
|nearest_unigene=Hs.381123
|num_trans=8
+
|num_trans=6144
 
|species=human
 
|species=human
 
|start=27251714
 
|start=27251714

Latest revision as of 06:03, 20 July 2021

Basic information about the TSS


TSS ID:hg_134516.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27251714
End:27251741
Strand:+
TSS Score:1
Start of the center position in the TSS region:27251727
End of the center position in the TSS region:27251728



Gene and protein annotation


Transcript_name:ENST00000326092.8
Distance:-118
GeneID:6144
HGNC/MGI_ID:HGNC:10313
UniProt_ID:Q6IAX2
Gene_name:ribosomal protein L21
Gene_symbol:RPL21
Gene_synonyms:DKFZp686C06101 FLJ27458 L21 MGC104274 MGC104275 MGC71252
Gene_source:HGNC:10313



Transcript annotation


Transcript_name:ENST00000326092.8
Distance:-118
Num_trans:6144
All_trans:HGNC:10313



TATA-Box annotation


Distance to TSS:173
Nearest PromoterID:NM_000982
Entrez ID:6144
Nearest Unigene:Hs.381123
Nearest Refseq:NM_000982
Nearest Ensembl:ENSG00000122026
Gene Name:ribosomal protein L21
Gene Alias:HYPT12|L21
Gene Description:ribosomal protein L21
Gene Type:protein-coding
CpG%:0.08
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):