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Difference between revisions of "TSS:Hg 134768.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000440264.5:-6 AK301897:18 NM_001111046:-79 NM_001111047:-79 NM_001111045:353 AK314261:353 ENST00000630422.2:-389 AK316392:-389
+
|all_trans=HGNC:1577
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NM_003914
 
|nearest_refseq=NM_003914
 
|nearest_unigene=Hs.417050
 
|nearest_unigene=Hs.417050
|num_trans=8
+
|num_trans=8900
 
|species=human
 
|species=human
 
|start=36431908
 
|start=36431908

Latest revision as of 06:09, 20 July 2021

Basic information about the TSS


TSS ID:hg_134768.1
Species:human
Chr:chr13
TSS Classification:yes
Start:36431908
End:36431919
Strand:+
TSS Score:1
Start of the center position in the TSS region:36431913
End of the center position in the TSS region:36431914



Gene and protein annotation


Transcript_name:ENST00000440264.5
Distance:-6
GeneID:8900
HGNC/MGI_ID:HGNC:1577
UniProt_ID:P78396
Gene_name:cyclin A1
Gene_symbol:CCNA1
Gene_synonyms:CT146
Gene_source:HGNC:1577



Transcript annotation


Transcript_name:ENST00000440264.5
Distance:-6
Num_trans:8900
All_trans:HGNC:1577



TATA-Box annotation


Distance to TSS:84
Nearest PromoterID:NM_001111047
Entrez ID:8900
Nearest Unigene:Hs.417050
Nearest Refseq:NM_003914
Nearest Ensembl:ENSG00000133101
Gene Name:cyclin A1
Gene Alias:CT146
Gene Description:cyclin A1
Gene Type:protein-coding
CpG%:0.105
GC%:0.721393
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):