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Difference between revisions of "TSS:Hg 134771.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=NM_001111045:0 AK314261:0 ENST00000255465.7:215 NM_003914:215 AK225146:215 U66838:216 ENST00000625767.1:243 BC035479:243 BC036346:243 HM005347:292 AK301897:-325 AB462995:342 AM393372:342 DQ894488:342 DQ891303:342 BT019577:342 ENST00000440264.5:-359 NM_001111046:-432 NM_001111047:-432
+
|all_trans=HGNC:1577
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.125
 
|cpg_percent=0.125
Line 22: Line 22:
 
|nearest_refseq=NM_003914
 
|nearest_refseq=NM_003914
 
|nearest_unigene=Hs.417050
 
|nearest_unigene=Hs.417050
|num_trans=19
+
|num_trans=8900
 
|species=human
 
|species=human
 
|start=36432261
 
|start=36432261
 
|start_of_center_position=36432270
 
|start_of_center_position=36432270
 
|strand=+
 
|strand=+
|transcript_name=NM_001111045 AK314261
+
|transcript_name=AK314261
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_134771.1
 
|tss_id=hg_134771.1

Latest revision as of 06:09, 20 July 2021

Basic information about the TSS


TSS ID:hg_134771.1
Species:human
Chr:chr13
TSS Classification:yes
Start:36432261
End:36432280
Strand:+
TSS Score:1
Start of the center position in the TSS region:36432270
End of the center position in the TSS region:36432271



Gene and protein annotation


Transcript_name:AK314261
Distance:0
GeneID:8900
HGNC/MGI_ID:HGNC:1577
UniProt_ID:B2RAM9 P78396
Gene_name:cyclin A1
Gene_symbol:CCNA1
Gene_synonyms:CT146
Gene_source:HGNC:1577



Transcript annotation


Transcript_name:AK314261
Distance:0
Num_trans:8900
All_trans:HGNC:1577



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_001111045
Entrez ID:8900
Nearest Unigene:Hs.417050
Nearest Refseq:NM_003914
Nearest Ensembl:ENSG00000133101
Gene Name:cyclin A1
Gene Alias:CT146
Gene Description:cyclin A1
Gene Type:protein-coding
CpG%:0.125
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):