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Difference between revisions of "TSS:Hg 135526.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AL834203:-8 AK289600:23 BC045177:40 ENST00000462234.5:42 AK289714:56 AK295423:70 ENST00000441784.5:-85 NM_001242870:-85 NM_144595:-85 NM_001366666:-85 ENST00000465831.1:-104 ENST00000314070.9:-144 ENST00000351546.7:-144 NM_001242871:-144 NM_001242869:-144 ENST00000496045.5:224
+
|all_trans=HGNC:26387
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0
 
|cpg_percent=0
Line 22: Line 22:
 
|nearest_refseq=NM_144595
 
|nearest_refseq=NM_144595
 
|nearest_unigene=Hs.349955
 
|nearest_unigene=Hs.349955
|num_trans=16
+
|num_trans=122060
 
|species=human
 
|species=human
 
|start=77741303
 
|start=77741303

Latest revision as of 06:25, 20 July 2021

Basic information about the TSS


TSS ID:hg_135526.1
Species:human
Chr:chr13
TSS Classification:yes
Start:77741303
End:77741314
Strand:+
TSS Score:1
Start of the center position in the TSS region:77741308
End of the center position in the TSS region:77741309



Gene and protein annotation


Transcript_name:AL834203
Distance:-8
GeneID:122060
HGNC/MGI_ID:HGNC:26387
UniProt_ID:
Gene_name:SLAIN motif family member 1
Gene_symbol:SLAIN1
Gene_synonyms:FLJ30046
Gene_source:HGNC:26387



Transcript annotation


Transcript_name:AL834203
Distance:-8
Num_trans:122060
All_trans:HGNC:26387



TATA-Box annotation


Distance to TSS:90
Nearest PromoterID:NM_001242870
Entrez ID:122060
Nearest Unigene:Hs.349955
Nearest Refseq:NM_144595
Nearest Ensembl:ENSG00000139737
Gene Name:SLAIN motif family member 1
Gene Alias:C13orf32
Gene Description:SLAIN motif family member 1
Gene Type:protein-coding
CpG%:0
GC%:0.353234
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):