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Difference between revisions of "TSS:Hg 135527.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000462234.5:0 AK289600:0 BC045177:0 AK289714:0 AK295423:0 AL834203:-36 ENST00000441784.5:-113 NM_001242870:-113 NM_144595:-113 NM_001366666:-113 ENST00000465831.1:-132 ENST00000496045.5:154 ENST00000314070.9:-172 ENST00000351546.7:-172 NM_001242871:-172 NM_001242869:-172
+
|all_trans=HGNC:26387
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 22: Line 22:
 
|nearest_refseq=NM_144595
 
|nearest_refseq=NM_144595
 
|nearest_unigene=Hs.349955
 
|nearest_unigene=Hs.349955
|num_trans=16
+
|num_trans=122060
 
|species=human
 
|species=human
 
|start=77741331
 
|start=77741331

Latest revision as of 06:25, 20 July 2021

Basic information about the TSS


TSS ID:hg_135527.1
Species:human
Chr:chr13
TSS Classification:yes
Start:77741331
End:77741384
Strand:+
TSS Score:1
Start of the center position in the TSS region:77741357
End of the center position in the TSS region:77741358



Gene and protein annotation


Transcript_name:ENST00000462234.5 AK289600 BC045177 AK289714 AK295423
Distance:0
GeneID:122060
HGNC/MGI_ID:HGNC:26387
UniProt_ID:C9JP03 Q7L0J2
Gene_name:SLAIN motif family member 1
Gene_symbol:SLAIN1
Gene_synonyms:FLJ30046
Gene_source:HGNC:26387



Transcript annotation


Transcript_name:ENST00000462234.5 AK289600 BC045177 AK289714 AK295423
Distance:0
Num_trans:122060
All_trans:HGNC:26387



TATA-Box annotation


Distance to TSS:139
Nearest PromoterID:NM_001242870
Entrez ID:122060
Nearest Unigene:Hs.349955
Nearest Refseq:NM_144595
Nearest Ensembl:ENSG00000139737
Gene Name:SLAIN motif family member 1
Gene Alias:C13orf32
Gene Description:SLAIN motif family member 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.39801
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):