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Difference between revisions of "TSS:Hg 135528.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK295423:-10 AK289714:-24 ENST00000462234.5:-38 BC045177:-40 AK289600:-57 AL834203:-98 ENST00000496045.5:130 ENST00000441784.5:-175 NM_001242870:-175 NM_144595:-175 NM_001366666:-175 ENST00000465831.1:-194 ENST00000314070.9:-234 ENST00000351546.7:-234 NM_001242871:-234 NM_001242869:-234
+
|all_trans=HGNC:26387
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 22: Line 22:
 
|nearest_refseq=NM_144595
 
|nearest_refseq=NM_144595
 
|nearest_unigene=Hs.349955
 
|nearest_unigene=Hs.349955
|num_trans=16
+
|num_trans=122060
 
|species=human
 
|species=human
 
|start=77741393
 
|start=77741393

Latest revision as of 06:25, 20 July 2021

Basic information about the TSS


TSS ID:hg_135528.1
Species:human
Chr:chr13
TSS Classification:yes
Start:77741393
End:77741408
Strand:+
TSS Score:1
Start of the center position in the TSS region:77741400
End of the center position in the TSS region:77741401



Gene and protein annotation


Transcript_name:AK295423
Distance:-10
GeneID:122060
HGNC/MGI_ID:HGNC:26387
UniProt_ID:
Gene_name:SLAIN motif family member 1
Gene_symbol:SLAIN1
Gene_synonyms:FLJ30046
Gene_source:HGNC:26387



Transcript annotation


Transcript_name:AK295423
Distance:-10
Num_trans:122060
All_trans:HGNC:26387



TATA-Box annotation


Distance to TSS:182
Nearest PromoterID:NM_001242870
Entrez ID:122060
Nearest Unigene:Hs.349955
Nearest Refseq:NM_144595
Nearest Ensembl:ENSG00000139737
Gene Name:SLAIN motif family member 1
Gene Alias:C13orf32
Gene Description:SLAIN motif family member 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.442786
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):