Personal tools

Difference between revisions of "TSS:Hg 13968.1"

From referenceTSS

Jump to: navigation, search
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|UNR=
 
|UNR=
|all_trans=ENST00000525132.1:0 AB020692:0 AF077054:2 ENST00000261443.9:-5 BC017662:-5 BC032446:-5 AK022516:7 AK022528:7 CR749431:-12 ENST00000534699.5:-13 AK290146:-13 ENST00000339438.10:-14 BX648780:-14 ENST00000358528.9:-15 NM_001007553:-15 NM_007158:-15 NM_001242892:-15 NM_001242893:-15 NM_001130523:-15 ENST00000529046.5:-18 ENST00000525970.5:-18 ENST00000533818.5:-18 ENST00000524652.1:-18 ENST00000369530.5:-34 ENST00000530886.5:-58 ENST00000610726.4:-81 NM_001242891:-81
+
|all_trans=HGNC:29905
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.085
 
|cpg_percent=0.085
Line 23: Line 23:
 
|nearest_refseq=NM_007158
 
|nearest_refseq=NM_007158
 
|nearest_unigene=Hs.69855
 
|nearest_unigene=Hs.69855
|num_trans=27
+
|num_trans=7812
 
|species=human
 
|species=human
 
|start=114757958
 
|start=114757958

Latest revision as of 07:56, 20 July 2021

Basic information about the TSS


TSS ID:hg_13968.1
Species:human
Chr:chr1
TSS Classification:yes
Start:114757958
End:114757969
Strand:-
TSS Score:1
Start of the center position in the TSS region:114757963
End of the center position in the TSS region:114757964



Gene and protein annotation


Transcript_name:ENST00000525132.1 AB020692
Distance:0
GeneID:7812
HGNC/MGI_ID:HGNC:29905
UniProt_ID:E9PJK7
Gene_name:cold shock domain containing E1
Gene_symbol:CSDE1
Gene_synonyms:D1S155E UNR
Gene_source:HGNC:29905



Transcript annotation


Transcript_name:ENST00000525132.1 AB020692
Distance:0
Num_trans:7812
All_trans:HGNC:29905



TATA-Box annotation


Distance to TSS:20
Nearest PromoterID:NM_001007553
Entrez ID:7812
Nearest Unigene:Hs.69855
Nearest Refseq:NM_007158
Nearest Ensembl:ENSG00000009307
Gene Name:cold shock domain containing E1
Gene Alias:D1S155E|UNR
Gene Description:cold shock domain containing E1
Gene Type:protein-coding
CpG%:0.085
GC%:0.621891
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):