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Difference between revisions of "TSS:Hg 14871.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|SHCA=
 
|SHCA=
|all_trans=ENST00000414115.5:-1 ENST00000444179.5:15 AB208849:308
+
|all_trans=HGNC:10840
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 23: Line 23:
 
|nearest_refseq=NM_003029
 
|nearest_refseq=NM_003029
 
|nearest_unigene=Hs.433795
 
|nearest_unigene=Hs.433795
|num_trans=3
+
|num_trans=6464
 
|species=human
 
|species=human
 
|start=154968888
 
|start=154968888

Latest revision as of 11:13, 20 July 2021

Basic information about the TSS


TSS ID:hg_14871.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154968888
End:154968892
Strand:-
TSS Score:1
Start of the center position in the TSS region:154968890
End of the center position in the TSS region:154968891



Gene and protein annotation


Transcript_name:ENST00000414115.5
Distance:-1
GeneID:6464
HGNC/MGI_ID:HGNC:10840
UniProt_ID:Q5T188
Gene_name:SHC adaptor protein 1
Gene_symbol:SHC1
Gene_synonyms:ShcA p66
Gene_source:HGNC:10840



Transcript annotation


Transcript_name:ENST00000414115.5
Distance:-1
Num_trans:6464
All_trans:HGNC:10840



TATA-Box annotation


Distance to TSS:1857
Nearest PromoterID:NM_183001
Entrez ID:6464
Nearest Unigene:Hs.433795
Nearest Refseq:NM_003029
Nearest Ensembl:ENSG00000160691
Gene Name:SHC adaptor protein 1
Gene Alias:SHC|SHCA
Gene Description:SHC adaptor protein 1
Gene Type:protein-coding
CpG%:0.01
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):