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Difference between revisions of "TSS:Hg 14882.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|SHCA=
 
|SHCA=
|all_trans=AK225332:0 BX647136:-30 U73377:-39 ENST00000368445.9:-60 BC011813:-60 BC017283:-60 AK296786:-63 ENST00000448116.7:-66 ENST00000368449.8:-66 NM_001130040:-66 NM_183001:-66 BC033925:-66 BX647149:-66 LP764910:-66 LP764912:-66 AK096169:-66 AB451255:141 AB451379:141 AB527815:141 HQ448284:470 KJ892137:470 CU680810:470
+
|all_trans=HGNC:10840
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.015
 
|cpg_percent=0.015
Line 23: Line 23:
 
|nearest_refseq=NM_003029
 
|nearest_refseq=NM_003029
 
|nearest_unigene=Hs.433795
 
|nearest_unigene=Hs.433795
|num_trans=22
+
|num_trans=6464
 
|species=human
 
|species=human
 
|start=154970666
 
|start=154970666

Latest revision as of 11:15, 20 July 2021

Basic information about the TSS


TSS ID:hg_14882.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154970666
End:154970681
Strand:-
TSS Score:1
Start of the center position in the TSS region:154970673
End of the center position in the TSS region:154970674



Gene and protein annotation


Transcript_name:AK225332
Distance:0
GeneID:6464
HGNC/MGI_ID:HGNC:10840
UniProt_ID:
Gene_name:SHC adaptor protein 1
Gene_symbol:SHC1
Gene_synonyms:ShcA p66
Gene_source:HGNC:10840



Transcript annotation


Transcript_name:AK225332
Distance:0
Num_trans:6464
All_trans:HGNC:10840



TATA-Box annotation


Distance to TSS:73
Nearest PromoterID:NM_183001
Entrez ID:6464
Nearest Unigene:Hs.433795
Nearest Refseq:NM_003029
Nearest Ensembl:ENSG00000160691
Gene Name:SHC adaptor protein 1
Gene Alias:SHC|SHCA
Gene Description:SHC adaptor protein 1
Gene Type:protein-coding
CpG%:0.015
GC%:0.636816
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):