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Difference between revisions of "TSS:Hg 14883.1"

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{{TSSDetail
 
{{TSSDetail
 
|SHCA=
 
|SHCA=
|all_trans=BX647136:0 U73377:-4 ENST00000368445.9:-25 BC011813:-25 BC017283:-25 AK296786:-28 ENST00000448116.7:-31 ENST00000368449.8:-31 NM_001130040:-31 NM_183001:-31 BC033925:-31 BX647149:-31 LP764910:-31 LP764912:-31 AK096169:-31 AK225332:34 AB451255:180 AB451379:180 AB527815:180
+
|all_trans=HGNC:10840
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.025
 
|cpg_percent=0.025
Line 23: Line 23:
 
|nearest_refseq=NM_003029
 
|nearest_refseq=NM_003029
 
|nearest_unigene=Hs.433795
 
|nearest_unigene=Hs.433795
|num_trans=19
+
|num_trans=6464
 
|species=human
 
|species=human
 
|start=154970705
 
|start=154970705

Latest revision as of 11:15, 20 July 2021

Basic information about the TSS


TSS ID:hg_14883.1
Species:human
Chr:chr1
TSS Classification:yes
Start:154970705
End:154970716
Strand:-
TSS Score:1
Start of the center position in the TSS region:154970710
End of the center position in the TSS region:154970711



Gene and protein annotation


Transcript_name:BX647136
Distance:0
GeneID:6464
HGNC/MGI_ID:HGNC:10840
UniProt_ID:
Gene_name:SHC adaptor protein 1
Gene_symbol:SHC1
Gene_synonyms:ShcA p66
Gene_source:HGNC:10840



Transcript annotation


Transcript_name:BX647136
Distance:0
Num_trans:6464
All_trans:HGNC:10840



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NM_183001
Entrez ID:6464
Nearest Unigene:Hs.433795
Nearest Refseq:NM_003029
Nearest Ensembl:ENSG00000160691
Gene Name:SHC adaptor protein 1
Gene Alias:SHC|SHCA
Gene Description:SHC adaptor protein 1
Gene Type:protein-coding
CpG%:0.025
GC%:0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):